rs6967322 chr7:64313865 T>C
- Sequence
cccagtgtctgattacatcttctg[T/C]cacttaggattgaaacgggtgggg
- ASB in cell types
- keratinocytes CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SNAI2_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | -5.22 | 3.04 | 2.00 | n/a | No Hit | |||
| ETS1_HUMAN | 2.20 | 0.12 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Muscle_Skeletal, Pituitary, Testis, Thyroid