rs6968033 chr7:106314304 C>T
- Sequence
tcagtagtctcttatgtaagtttc[C/T]gtatcctgactctaacttccctga
- ASB in cell types
- CD14+ monocytes macrophages form periferal blood 22RV1 (prostate carcinoma)
- ASB for transcription factors
- STAT1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.28 | -0.04 | 3.00 | 0.49 | Weak Discordant | |||
| ANDR_HUMAN | 2.17 | -0.49 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP ldl cholesterol, resistance to kuru in aged women despite likely exposure, total cholesterol, variant creutzfeldt-jakob disease