rs6968293 chr7:48924659 A>C

Sequence
cgccgcgctgctctttgacctcgc[A/C]gggtgtgaagaagatgcgcagctc
ASB in cell types
SMMC-7721 (hepatocellular carcinoma)
ASB for transcription factors
PTEN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PTEN_HUMAN 2.37 -3.75 9.5·10-31.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP docetaxel response in lymphoblastoid cell lines,  hdl cholesterol,  refractive error,  rheumatoid arthritis,  total cholesterol,  transmission distortion,  urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Cerebellum,  Testis

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