rs6968390 chr7:106462411 G>A
- Sequence
tctttcaaagaaacaggaaaacat[G/A]taagaaatgctcttaaaccactgg
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- RAD21_HUMAN STAG1_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.25 | 0.01 | 1.68 | n/a | n/a | |||
| STAG1_HUMAN | 0.93 | 0.57 | 1.00 | n/a | n/a | |||
| REST_HUMAN | 1.70 | -2.76 | 1.75 | n/a | No Hit |
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