rs697139 chr5:58460364 C>G
- Sequence
tcgaaggctccgagcctcagcgta[C/G]aaaacagaatcgcgagggccgacg
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) HepG2 (hepatoblastoma) monocytes from periferal blood LNCaP (prostate carcinoma)
- ASB for transcription factors
- ZFX_HUMAN E2F1_HUMAN TBX3_HUMAN INT11_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.45 | -2.29 | 1.33 | n/a | No Hit | |||
| E2F1_HUMAN | 2.35 | -1.87 | 1.00 | n/a | No Hit | |||
| TBX3_HUMAN | 2.90 | n/a | 1.00 | n/a | No Hit | |||
| INT11_HUMAN | -0.21 | 1.55 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4