rs697140 chr5:58460282 T>G
- Sequence
cgcctcaaacgccggccgccgaga[T/G]ctcttgcggccgcgggaaggcctt
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) SEM (childhood B acute lymphoblastic leukemia) LNCaP (prostate carcinoma) CD14+ monocytes
- ASB for transcription factors
- ZFX_HUMAN STAT1_HUMAN KMT2A_HUMAN INT11_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.42 | -2.19 | 1.33 | n/a | No Hit | |||
| STAT1_HUMAN | 1.37 | -0.64 | 3.00 | n/a | No Hit | |||
| KMT2A_HUMAN | 0.08 | 2.32 | 1.00 | 1.26 | Weak Concordant | |||
| INT11_HUMAN | 0.08 | 1.21 | 2.00 | n/a | n/a |
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Motif analysis
