rs6972521 chr7:155724940 A>C
- Sequence
cctgataggcagttgggttatttc[A/C]agtcttcggatgttgtgattagag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.38 | 0.48 | 1.10 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.55 | -0.15 | 1.00 | n/a | n/a |
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