rs697287 chr3:64225426 G>A
- Sequence
ggtcaaaaaataataataactctc[G/A]gtggcgctgctggtggtgcctgag
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line) neural cell
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.41 | 0.23 | 1.15 | -3.47 | Concordant | |||
| STAG1_HUMAN | 1.73 | -0.34 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | 1.69 | -1.51 | 1.00 | n/a | No Hit |
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Motif analysis
