rs6973851 chr7:130346497 C>T

Sequence
aggaggaagaagcatgcagggcac[C/T]cctggaggcgggacgcgccctggg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZIC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZIC2_HUMAN 3.46 n/a 8.4·10-61.00 2.00 -0.16 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

ZIC2_HUMAN Weak Concordant
ZIC2_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) height
GTEx eQTL Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Esophagus_Muscularis Lung Nerve_Tibial Whole_Blood

Download