rs6974341 chr7:55255750 T>C
- Sequence
cgcgtggcctgcgcagcgatcagg[T/C]cctcaagtcccgaagccccagtgc
- ASB in cell types
- KB (cervical adenocarcinoma) GM12878 (female B-cells lymphoblastoid cell line) THP-1 (acute monocytic leukemia) IMR90 (lung fibroblasts)
- ASB for transcription factors
- CTCF_HUMAN ELF1_HUMAN RAD21_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.91 | 0.42 | 1.51 | n/a | No Hit | |||
| ELF1_HUMAN | n/a | 3.48 | 1.50 | n/a | No Hit | |||
| RAD21_HUMAN | 1.36 | 0.56 | 1.15 | n/a | n/a | |||
| IKZF1_HUMAN | -0.58 | 2.21 | 1.00 | n/a | n/a |
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