rs6974351 chr7:55255772 T>C
- Sequence
ggtcctcaagtcccgaagccccag[T/C]gccagcctccgaaaagctggcccg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) THP-1 (acute monocytic leukemia) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN ANDR_HUMAN RAD21_HUMAN TRI22_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.65 | 2.17 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.52 | -0.99 | 2.50 | n/a | No Hit | |||
| RAD21_HUMAN | 0.67 | 0.05 | 1.16 | n/a | n/a | |||
| TRI22_HUMAN | -0.47 | 1.82 | 1.33 | n/a | n/a |
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