rs6974779 chr7:128905007 A>G
- Sequence
gagtgtgtgtgtgtgtgttggggg[A/G]gcgggggtcaggggtcttttcttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) pancreas
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.12 | 0.04 | 1.36 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Cells_Cultured_fibroblasts, Pituitary, Testis, Thyroid