rs6977375 chr7:89685214 G>A
- Sequence
aggtgcaagttatattgaaaaaac[G/A]taatcatttggcaccttttcctca
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN MBL2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.11 | -0.07 | 1.55 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.94 | -0.32 | 1.55 | 2.42 | Discordant | |||
| MBL2_HUMAN | 2.17 | n/a | 1.00 | n/a | n/a |
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Motif analysis
