rs6977870 chr7:6516551 C>G

Sequence
gtaacgccagtgcctgggaaggca[C/G]ccgttgcttagcagaccgggaaag
ASB in cell types
WA01 (H1, human embryonic stem cells) AG09319 (fibroblasts) GM12878 (female B-cells lymphoblastoid cell line) LUHMES (lund human mesencephalic cells)
ASB for transcription factors
TIF1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1B_HUMAN 1.89 -0.16 0.031.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis Muscle_Skeletal Whole_Blood

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