rs6978173 chr7:112451377 C>G
- Sequence
aggcggggggaccactttctcccc[C/G]ctaggctgtgctccttcccctaac
- ASB in cell types
- HEK293 (embryonic kidney) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.08 | 2.04 | 1.25 | 0.92 | Weak Concordant | |||
| FOXK2_HUMAN | 2.17 | -2.16 | 1.00 | n/a | No Hit |
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Motif analysis
