rs6978745 chr7:106434001 G>A
- Sequence
agcaattctgaagttattttgagt[G/A]ttctaagattgagcaaataaataa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.67 | -0.35 | 1.46 | n/a | No Hit | |||
| ANDR_HUMAN | 1.31 | -0.01 | 1.47 | -2.00 | Concordant |
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Motif analysis
Genetic associations
GRASP chronic kidney disease, mitral annular calcium, suicide attempts in bipolar disorder (substance free), waist hip ratio