rs6979050 chr7:111752359 T>C
- Sequence
gggaaagcaaatcttttaggaggc[T/C]actgcagtaatcaggcactaggtg
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) Peyer's patch neutrophils from periferal blood
- ASB for transcription factors
- CTCF_HUMAN KDM1A_HUMAN HTF4_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.91 | 0.87 | 1.35 | n/a | No Hit | |||
| KDM1A_HUMAN | 1.51 | -3.35 | 1.33 | n/a | n/a | |||
| HTF4_HUMAN | 2.06 | n/a | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | 0.56 | 0.80 | 1.00 | n/a | n/a | |||
| ILF3_HUMAN | 1.78 | -1.59 | 1.75 | n/a | n/a |
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