rs6979174 chr7:24820381 G>C
- Sequence
cttctttagtttccctcatcaagt[G/C]tgtcctcaagagggcgctcctgat
- ASB in cell types
- CD14+ monocytes K562 (myelogenous leukemia) HS-SY-2(Monophasic synovial sarcoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- STAT1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -4.95 | 3.11 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | -0.04 | 0.98 | 1.18 | n/a | No Hit |
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