rs6979207 chr7:95686225 A>G

Sequence
tgctggtgctgaaatgtcagctgc[A/G]taaattggatgagcgggctttctt
ASB in cell types
A549 (lung carcinoma) neural cell GM02630 (Fanconi anemi) glioblastoma cells
ASB for transcription factors
SMC3_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN 1.85 0.78 4.4·10-31.00 1.92 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension),  infant head circumference,  parkinsons disease,  salmonella-induced pyroptosis
GTEx eQTL Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Testis

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