rs6982341 chr8:133217292 A>G
- Sequence
aaacaaacagagctacaacaaggc[A/G]tggcccactgtccctgctgacagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ESR1_HUMAN SMCA5_HUMAN MAX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.63 | 0.45 | 1.85 | -0.28 | Weak Concordant | |||
| SMCA5_HUMAN | 2.55 | -0.18 | 1.50 | n/a | n/a | |||
| MAX_HUMAN | 1.75 | -1.59 | 1.00 | n/a | No Hit |
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Motif analysis
