rs6985113 chr8:104686686 G>A
- Sequence
aggagaggtagaaggagctgactc[G/A]ttacattagcagaactctctgaac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte GM12890 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN IKZF1_HUMAN STAG1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.08 | 2.20 | 1.45 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.90 | 3.36 | 1.25 | n/a | n/a | |||
| STAG1_HUMAN | -2.43 | 2.27 | 1.10 | n/a | n/a | |||
| IKZF2_HUMAN | -3.40 | 3.44 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | -2.04 | 2.53 | 1.00 | n/a | No Hit |
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