rs6986779 chr8:141327691 C>T

Sequence
aacttgattcgtggacactgaaag[C/T]agaacttcatgtaatattcttgtt
ASB in cell types
EOL-1 (Acute myeloid leukemia)
ASB for transcription factors
REQU_HUMAN SMCA4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN 2.51 -4.75 0.041.00 2.00 n/a n/a
SMCA4_HUMAN 1.90 n/a 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI granulocyte count,  myeloid white cell count,  neutrophil count,  sum basophil neutrophil counts,  sum neutrophil eosinophil counts
GRASP birth weight,  height,  ldl cholesterol
GTEx eQTL Esophagus_Mucosa,  Muscle_Skeletal,  Spleen,  Stomach,  Whole_Blood

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