rs698885 chr1:16644262 C>G
- Sequence
atgatcggtgccccttcactacca[C/G]agtagttgaagatctgattaaatg
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) neural cell HEK293T (embryonic kidney)
- ASB for transcription factors
- IKZF1_HUMAN MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.15 | 1.78 | 2.00 | n/a | n/a | |||
| MTA2_HUMAN | n/a | 2.76 | 2.00 | n/a | n/a |
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