rs6990097 chr8:9555347 T>C
- Sequence
aagcacatagggtgagaaaaatta[T/C]agggaagggacaagagctcaaggg
- ASB for transcription factors
- ZN189_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | -5.08 | 3.00 | 2.00 | 1.82 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP aortic valve calcium, diastolic blood pressure (dbp), ldl cholesterol, parkinsons disease, total cholesterol, triglycerides
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellum, Brain_Cortex, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Colon_Transverse, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Testis, Thyroid