rs6991452 chr8:56242049 T>C
- Sequence
tttggaaccttgtggagttcagca[T/C]gatgaagccgcaatgctgccgaag
- ASB in cell types
- A549 (lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line) Peyer's patch GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.52 | 1.11 | 1.51 | n/a | No Hit | |||
| SMC3_HUMAN | -0.11 | 1.06 | 1.82 | n/a | n/a |
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