rs699165 chr3:136505855 A>G

Sequence
agcatgaagtgaaggaatggtcac[A/G]tgattccacagcagaacagctttc
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
RAD51_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD51_HUMAN -4.93 4.61 1.004.0·10-12 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI cigarettes smoked per day (mtag),  smoking behaviour (cigarettes smoked per day)
GRASP advanced age-related macular degeneration (geographic atrophy),  aortic valve calcium,  birth weight,  fasting insulin,  hdl cholesterol,  homa-b,  homa-ir,  triglycerides,  years of education
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cortex,  Brain_Hippocampus,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Testis,  Thyroid

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