rs6996114 chr8:60255049 A>G
- Sequence
taaagggtaagtggggaatttgag[A/G]gagtcatcaatcttactaatggga
- ASB in cell types
- renal cortex CyT49-derived endodermal cells
- ASB for transcription factors
- SIX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIX2_HUMAN | 1.75 | -0.86 | 1.17 | -2.58 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Colon_Transverse, Lung, Pituitary, Prostate, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Whole_Blood