rs6996190 chr8:57209752 T>C
- Sequence
cttggaagcatctggagaagggca[T/C]ggccacgagtagagaaatccaggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM19238 (female B-cells lymphoblastoid cell lines) GM12892 (female B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 3.32 | -2.54 | 1.00 | |||
| GM19238 (female B-cells lymphoblastoid cell lines) | 3.50 | -3.84 | 1.00 | |||
| GM12892 (female B-cells lymphoblastoid cell line) | 2.98 | n/a | 1.00 | |||
| GM02630 (Fanconi anemi) | 2.17 | -1.94 | 1.00 | |||
| pancreas | 2.21 | -1.68 | 1.00 |
Items per page:
1 – 5 of 5