rs6996619 chr8:102340836 G>C

Sequence
taatggaaaaaagaatataggtag[G/C]atatactttgtttcacataccgct
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.73 n/a 8.6·10-31.00 2.00 n/a No Hit
ANDR_HUMAN 2.17 n/a 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  systolic blood pressure (sbp),  total cholesterol
GTEx eQTL Esophagus_Muscularis,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid,  Whole_Blood

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