rs6998929 chr8:28622354 T>C
- Sequence
ggtgccgtatagccctccgccgtg[T/C]gcagccgggtgctggtgttgttgc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia) HCT-116 (colon carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN CDK9_HUMAN STAT1_HUMAN RBM25_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.29 | 0.38 | 1.40 | n/a | No Hit | |||
| CDK9_HUMAN | -0.73 | 2.19 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.96 | -0.31 | 3.00 | n/a | No Hit | |||
| RBM25_HUMAN | 1.11 | -0.05 | 1.00 | n/a | n/a |
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