rs7000987 chr8:120861608 C>T
- Sequence
gtgttattgtgcctgcagatgttg[C/T]aatgggctgtgccagctggcctcc
- ASB in cell types
- HepG2 (hepatoblastoma) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- CEBPA_HUMAN SUH_HUMAN BCL6_HUMAN HLF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | 1.82 | -2.83 | 1.50 | -3.61 | Concordant | |||
| SUH_HUMAN | 2.63 | -2.67 | 1.00 | n/a | No Hit | |||
| BCL6_HUMAN | 1.71 | -3.17 | 1.50 | n/a | No Hit | |||
| HLF_HUMAN | 2.25 | -4.19 | 1.50 | n/a | No Hit | |||
| P66A_HUMAN | 1.84 | -1.61 | 1.00 | n/a | n/a |
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Motif analysis
