rs7002400 chr8:140457748 G>A
- Sequence
tctgggctggcgcttcctactggc[G/A]gccgagccggcgctgctcctgcgc
- ASB in cell types
- HeLa (cervical adenocarcinoma) CD14+ monocytes adult erythroblasts breast tumor
- ASB for transcription factors
- STAT1_HUMAN INT11_HUMAN RBBP5_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.03 | n/a | 2.00 | n/a | No Hit | |||
| INT11_HUMAN | n/a | 2.06 | 4.20 | n/a | n/a | |||
| RBBP5_HUMAN | 3.07 | -5.41 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.76 | 0.10 | 1.75 | n/a | No Hit | |||
| BRD4_HUMAN | 1.70 | -0.07 | 2.14 | n/a | n/a |
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