rs7003945 chr8:144326802 G>A
- Sequence
cagcgcgttcaacccgcccgcgtc[G/A]ggcccgtcggcctcaaggacaacg
- ASB in cell types
- MV-4-11 (Childhood acute monocytic leukemia) HeLa (cervical adenocarcinoma) neutrophils from periferal blood BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- BRD4_HUMAN RAD21_HUMAN GCR_HUMAN TBP_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 0.37 | 1.25 | 1.81 | n/a | n/a | |||
| RAD21_HUMAN | 0.17 | 1.31 | 1.66 | n/a | n/a | |||
| GCR_HUMAN | 1.00 | -0.02 | 1.90 | n/a | No Hit | |||
| TBP_HUMAN | 0.53 | -0.01 | 1.17 | n/a | No Hit | |||
| CDN1B_HUMAN | -0.13 | 1.05 | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood