rs7004548 chr8:100625940 A>G

Sequence
aagattttgctttttaaaacctat[A/G]tcttggccaggcatggtagctcac
ASB in cell types
GM19239 (male B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.32 1.82 1.005.9·10-4 1.43 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Esophagus_Mucosa

Download