rs7004884 chr8:130123023 A>G

Sequence
cttatttgttcatggtagttttac[A/G]atcaaattaacttttgaaaagcct
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 2.16 1.000.02 1.67 0.61 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GRASP alcohol dependence symptoms,  parkinsons disease,  refractive error,  rheumatoid arthritis,  serum creatinine
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic

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