rs7005244 chr8:27311444 G>A
- Sequence
gagccccacccacttccggtgtgc[G/A]cgggaaatcttgggagagcggggt
- ASB in cell types
- HepG2 (hepatoblastoma) CTV-1 (Adult T acute lymphoblastic leukemia) neural cell CD14+ monocytes
- ASB for transcription factors
- NRF1_HUMAN RBM25_HUMAN SPI1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 3.51 | n/a | 2.00 | n/a | No Hit | |||
| RBM25_HUMAN | -2.77 | 3.17 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 0.06 | 1.42 | 1.47 | n/a | No Hit | |||
| STAT1_HUMAN | -0.14 | 2.43 | 1.67 | n/a | No Hit | |||
| ARI4B_HUMAN | -2.71 | 2.93 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Testis, Thyroid, Whole_Blood