rs7006334 chr8:66023035 A>G
- Sequence
ttccctgatccttgtgttagtcac[A/G]tgctgctgcagcctgtcgcatact
- ASB for transcription factors
- MITF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MITF_HUMAN | -5.08 | 3.00 | 2.00 | 4.34 | Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, alzheimers disease, birth weight, ldl cholesterol, rheumatoid arthritis, systolic blood pressure (sbp), total cholesterol, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Vagina, Whole_Blood