rs700755 chr7:47406044 A>G
- Sequence
tggagccctgccagactcctgatg[A/G]gcccgctgcccgcatgaattcctg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium) breast tumor
- ASB for transcription factors
- ESR1_HUMAN GCR_HUMAN FOXA1_HUMAN CTBP1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.26 | 2.08 | 2.31 | n/a | No Hit | |||
| GCR_HUMAN | 0.06 | 1.64 | 1.10 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.04 | 1.44 | 1.86 | n/a | No Hit | |||
| CTBP1_HUMAN | n/a | 3.84 | 2.00 | n/a | n/a | |||
| NFIB_HUMAN | n/a | 3.28 | 4.00 | 2.87 | Concordant |
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Motif analysis
