rs7011930 chr8:90164722 A>G

Sequence
cagtgcagacccagagcagcttcc[A/G]gctctcaagcgggtgcagggtgca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MEIS2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEIS2_HUMAN n/a 2.67 1.001.5·10-5 2.00 -1.59 Weak Discordant
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Motif analysis

MEIS2_HUMAN Weak Discordant
MEIS2_HUMAN pic

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Coronary,  Artery_Tibial,  Brain_Cortex,  Breast_Mammary_Tissue,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Liver,  Minor_Salivary_Gland,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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