rs701254 chr3:153885630 C>A

Sequence
tagactgatgtgagctttgtttgg[C/A]attagggcactcagagccatttaa
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN -1.84 2.30 1.000.04 1.50 1.02 Weak Concordant
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Motif analysis

OTX2_HUMAN Weak Concordant
OTX2_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  serum creatinine
GTEx eQTL Artery_Aorta,  Thyroid

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