rs701412 chr22:20285881 A>G
- Sequence
atcccggcctggtgagtgccggcc[A/G]ctcagttctgtggccctctgctgc
- ASB in cell types
- prostate gland HUES64 (embryonic stem cells) LNCaP (prostate carcinoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.68 | 2.08 | 1.90 | n/a | No Hit | |||
| RAD21_HUMAN | 2.96 | -1.35 | 1.79 | n/a | n/a |
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