rs7020045 chr9:86094083 T>C

Sequence
cagtcaccaagttttctgatggcc[T/C]ggaaatattccaccctgtcccaag
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.90 -5.13 4.5·10-31.00 2.00
breast tumor 2.77 -0.66 0.021.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  recurrent early onset major depressive disorder,  recurrent early onset major depressive disorder (females),  triglycerides change with statins
GTEx eQTL Adipose_Visceral_Omentum,  Adrenal_Gland,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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