rs7024144 chr9:1232509 A>C
- Sequence
ggatggcgagagttctgtttcctg[A/C]gaattaccagtaactgacaaatcc
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.43 | 2.38 | 1.60 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.10 | 1.34 | 1.66 | -2.10 | Discordant |
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Motif analysis
