rs7024744 chr9:112334026 A>T
- Sequence
ctccctctgccggcaggaaaagct[A/T]tggggacctgactcccaagagtag
- ASB in cell types
- erythroid cells HepG2 (hepatoblastoma) neural cell primary B-CLL cells
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.10 | 0.99 | 1.31 | n/a | No Hit | |||
| ANDR_HUMAN | -0.33 | 2.96 | 1.67 | n/a | No Hit | |||
| STAT1_HUMAN | -0.58 | 2.09 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, advanced age-related macular degeneration (geographic atrophy), aortic valve calcium, infant head circumference
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid