rs7024761 chr9:112334066 A>G
- Sequence
caagagtaggaaggaatgtcccac[A/G]aggaccccagaaacgaggtggaat
- ASB in cell types
- erythroid cells CD14+ monocytes neural cell 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN ANDR_HUMAN TEAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.00 | 1.06 | 1.28 | n/a | No Hit | |||
| STAT1_HUMAN | -1.94 | 3.04 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 0.08 | 3.28 | 1.83 | n/a | No Hit | |||
| TEAD3_HUMAN | 2.47 | -2.13 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid