rs702692 chr5:57176479 C>T

Sequence
gttgagtttatcctatgttattct[C/T]ggaagcctttcagtttcttgcagt
ASB in cell types
LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.66 2.31 1.001.7·10-7 1.92 n/a No Hit
ANDR_HUMAN -0.09 3.24 1.002.8·10-4 1.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Whole_Blood

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