rs702721 chr5:58460862 G>A
- Sequence
cctgaaccttgcagagcgaggtcg[G/A]cgtcctggcaaggcgtcctccgcc
- ASB in cell types
- foreskin keratinocyte THP-1 (acute monocytic leukemia) CD14+ monocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN ANDR_HUMAN ESR1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.55 | 0.87 | 1.02 | n/a | n/a | |||
| ANDR_HUMAN | -1.41 | 2.50 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | -0.44 | 3.13 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 0.14 | 3.06 | 2.00 | n/a | No Hit |
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