rs7027884 chr9:34773722 G>C

Sequence
ttctccccagaacccataacccca[G/C]tctaattatgagaaaaacatcaaa
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.72 n/a 9.6·10-31.00 3.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  systolic blood pressure (sbp),  total cholesterol,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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