rs7031884 chr9:100411747 A>C
- Sequence
tgcgcgctccctcagctccagcgc[A/C]gcagctctgggagacacgctgaac
- ASB in cell types
- BEAS-2B (bronchial epithelium) HepG2 (hepatoblastoma) CD34+ hematopoietic stem cells GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- GCR_HUMAN SP130_HUMAN TIF1B_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.45 | 1.34 | 1.00 | n/a | No Hit | |||
| SP130_HUMAN | -2.46 | 2.87 | 1.00 | n/a | n/a | |||
| TIF1B_HUMAN | 2.48 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, hdl cholesterol, parkinsons disease, refractive error, triglycerides, triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood