rs7034641 chr9:96317556 C>T
- Sequence
ttagggtgccctctgctggccaca[C/T]gtggaagcaagtgtaaaagtctta
- ASB in cell types
- WA09 (embryonic stem cells) MDM(monocyte derived macrophages) HUVEC-C (HUVEC, umbilical vein endothelial cells) MM1.S (plasma cell myeloma)
- ASB for transcription factors
- RAD21_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.82 | 0.14 | 1.53 | n/a | n/a | |||
| SMC1A_HUMAN | 2.17 | -0.12 | 2.20 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Colon_Transverse, Liver, Nerve_Tibial, Pancreas, Small_Intestine_Terminal_Ileum, Testis, Thyroid